So about that 56/44 faction ratios...
Everyone said the server would become like this, yet they wanted to wait and see until the problem came about. Every single TBC server has turned out this way with the exception of 1, and that's because the team implemented a log in cap for both alliance and horde. At this time there really isn't much that can be done to solve this issue, I can only see 2 options.
1) Restart server and make it so you can only create characters from one faction, not both, and implement a 7k cap on both sides. (I'll get flamed for this by Horde kiddies because now they wont be able to 200v10 in all areas). This will balance the ratios most likely.
2) Change the server to PvE for a month or so to let alliance quest and catch up. Then after that period switch the server back to PvP. This wont solve the ratio imbalances but it'll give Alliance some free space to level up.
Every single option the team brings out to try and solve this issue will most likely fail, I've seen this before with every other TBC realm, no amount of free bags, free gold, free transfers, or free mounts will solve this.